Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm12887B1AVM1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.36□□□□□ -0.43
Gm12887B1AVM1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm12887B1AVM1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Mir5122-201ENSMUST00000175004 89 ntBASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm12887B1AVM1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms