Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a5A6H584 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a5A6H584 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Col6a5A6H584 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.4□□□□□ -0.58
Col6a5A6H584 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.4□□□□□ -0.58
Col6a5A6H584 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Gm12341-201ENSMUST00000119724 503 ntBASIC11.4□□□□□ -0.58
Col6a5A6H584 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.4□□□□□ -0.58
Col6a5A6H584 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.4□□□□□ -0.58
Col6a5A6H584 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.4□□□□□ -0.58
Col6a5A6H584 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.4□□□□□ -0.58
Col6a5A6H584 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col6a5A6H584 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col6a5A6H584 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Col6a5A6H584 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm2495-201ENSMUST00000191160 466 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm37714-201ENSMUST00000194742 342 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm46209-201ENSMUST00000217912 553 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm16476-201ENSMUST00000221544 139 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.39□□□□□ -0.59
Col6a5A6H584 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.39□□□□□ -0.59
Col6a5A6H584 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a5A6H584 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col6a5A6H584 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a5A6H584 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms