Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7-1A0A0G2JEV5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7-1A0A0G2JEV5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm10231-201ENSMUST00000181584 441 ntBASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm29518-201ENSMUST00000190858 372 ntBASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm10175-202ENSMUST00000208752 441 ntBASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm9172-201ENSMUST00000212092 954 ntBASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav7-1A0A0G2JEV5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Grk6-207ENSMUST00000225925 2769 ntBASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm14722-201ENSMUST00000118943 689 ntBASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7-1A0A0G2JEV5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav7-1A0A0G2JEV5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms