Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ighv1-56A0A0A6YXG2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Gm9172-201ENSMUST00000212092 954 ntBASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ighv1-56A0A0A6YXG2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms