Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-1A0A075B699 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Gm27867-201ENSMUST00000184778 125 ntBASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-1A0A075B699 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Gm25745-201ENSMUST00000174945 133 ntBASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Gm9172-201ENSMUST00000212092 954 ntBASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-1A0A075B699 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-1A0A075B699 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-1A0A075B699 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav9d-1A0A075B699 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-1A0A075B699 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-1A0A075B699 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms