Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.13□□□□□ -0.47
Trav17A0A075B655 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav17A0A075B655 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Gm43799-201ENSMUST00000201845 579 ntBASIC12.12□□□□□ -0.47
Trav17A0A075B655 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.12□□□□□ -0.47
Trav17A0A075B655 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav17A0A075B655 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.12□□□□□ -0.47
Trav17A0A075B655 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.11□□□□□ -0.47
Trav17A0A075B655 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav17A0A075B655 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.11□□□□□ -0.47
Trav17A0A075B655 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav17A0A075B655 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav17A0A075B655 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms