Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Actl10-202ENSMUST00000226583 1501 ntBASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Efs-202ENSMUST00000227037 2540 ntBASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-4A0A075B654 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms