Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trav16A0A075B653 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Mir6404-201ENSMUST00000183699 94 ntBASIC11.81□□□□□ -0.52
Trav16A0A075B653 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Gm5417-201ENSMUST00000079706 384 ntBASIC11.81□□□□□ -0.52
Trav16A0A075B653 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.81□□□□□ -0.52
Trav16A0A075B653 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.81□□□□□ -0.52
Trav16A0A075B653 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav16A0A075B653 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.8□□□□□ -0.52
Trav16A0A075B653 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.8□□□□□ -0.52
Trav16A0A075B653 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav16A0A075B653 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms