Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.98□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm15565-201ENSMUST00000118890 427 ntBASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms