Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Gm9682-201ENSMUST00000197505 556 ntBASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Gm7862-201ENSMUST00000121461 292 ntBASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv4A0A075B5I2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Gm15173-201ENSMUST00000122049 433 ntBASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv4A0A075B5I2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv4A0A075B5I2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv4A0A075B5I2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv4A0A075B5I2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv4A0A075B5I2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv4A0A075B5I2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms