Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.75□□□□□ -0.53
PdfS4R2K0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
PdfS4R2K0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
PdfS4R2K0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Gm23634-201ENSMUST00000175071 91 ntBASIC11.75□□□□□ -0.53
PdfS4R2K0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
PdfS4R2K0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.75□□□□□ -0.53
PdfS4R2K0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
PdfS4R2K0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
PdfS4R2K0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
PdfS4R2K0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.75□□□□□ -0.53
PdfS4R2K0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.75□□□□□ -0.53
PdfS4R2K0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PdfS4R2K0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.74□□□□□ -0.53
PdfS4R2K0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PdfS4R2K0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
PdfS4R2K0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.74□□□□□ -0.53
PdfS4R2K0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PdfS4R2K0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.74□□□□□ -0.53
PdfS4R2K0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
PdfS4R2K0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.74□□□□□ -0.53
PdfS4R2K0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PdfS4R2K0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdfS4R2K0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PdfS4R2K0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdfS4R2K0 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms