Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cr1Q9Z0D9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cr1Q9Z0D9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm14722-201ENSMUST00000118943 689 ntBASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm7889-201ENSMUST00000185591 958 ntBASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Gm29257-201ENSMUST00000186115 639 ntBASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cr1Q9Z0D9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms