Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Gm25406-201ENSMUST00000157599 105 ntBASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn2Q9R0A1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Gm25745-201ENSMUST00000174945 133 ntBASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Gm43347-201ENSMUST00000200226 580 ntBASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.62■□□□□ 0.09
Clcn2Q9R0A1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clcn2Q9R0A1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clcn2Q9R0A1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clcn2Q9R0A1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Clcn2Q9R0A1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Clcn2Q9R0A1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms