Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Gm29541-201ENSMUST00000191351 678 ntBASIC14.35□□□□□ -0.11
SrfQ9JM73 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SrfQ9JM73 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.35□□□□□ -0.11
SrfQ9JM73 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SrfQ9JM73 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SrfQ9JM73 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SrfQ9JM73 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SrfQ9JM73 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SrfQ9JM73 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.35□□□□□ -0.11
SrfQ9JM73 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SrfQ9JM73 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SrfQ9JM73 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SrfQ9JM73 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Gm13015-201ENSMUST00000118674 204 ntBASIC14.34□□□□□ -0.11
SrfQ9JM73 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.34□□□□□ -0.11
SrfQ9JM73 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.34□□□□□ -0.11
SrfQ9JM73 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.34□□□□□ -0.11
SrfQ9JM73 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SrfQ9JM73 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.34□□□□□ -0.11
SrfQ9JM73 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.34□□□□□ -0.11
SrfQ9JM73 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SrfQ9JM73 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SrfQ9JM73 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SrfQ9JM73 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SrfQ9JM73 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.33□□□□□ -0.12
SrfQ9JM73 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.33□□□□□ -0.12
SrfQ9JM73 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC14.33□□□□□ -0.12
SrfQ9JM73 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.33□□□□□ -0.12
SrfQ9JM73 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.33□□□□□ -0.12
SrfQ9JM73 Gm27680-201ENSMUST00000184192 160 ntBASIC14.33□□□□□ -0.12
SrfQ9JM73 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.33□□□□□ -0.12
SrfQ9JM73 Gm38294-201ENSMUST00000192831 381 ntBASIC14.33□□□□□ -0.12
SrfQ9JM73 Gm7730-201ENSMUST00000212486 454 ntBASIC14.33□□□□□ -0.12
SrfQ9JM73 Thoc7-209ENSMUST00000225325 765 ntBASIC14.33□□□□□ -0.12
SrfQ9JM73 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.33□□□□□ -0.12
SrfQ9JM73 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.33□□□□□ -0.12
SrfQ9JM73 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.33□□□□□ -0.12
SrfQ9JM73 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SrfQ9JM73 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SrfQ9JM73 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SrfQ9JM73 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SrfQ9JM73 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SrfQ9JM73 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SrfQ9JM73 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.32□□□□□ -0.12
SrfQ9JM73 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.32□□□□□ -0.12
SrfQ9JM73 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SrfQ9JM73 Gm18766-201ENSMUST00000189811 808 ntBASIC14.32□□□□□ -0.12
SrfQ9JM73 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.32□□□□□ -0.12
SrfQ9JM73 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.32□□□□□ -0.12
SrfQ9JM73 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SrfQ9JM73 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms