Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf13bQ9ET35 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf13bQ9ET35 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf13bQ9ET35 Grk6-207ENSMUST00000225925 2769 ntBASIC12.02□□□□□ -0.48
Tnfrsf13bQ9ET35 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf13bQ9ET35 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf13bQ9ET35 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf13bQ9ET35 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf13bQ9ET35 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf13bQ9ET35 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm15565-201ENSMUST00000118890 427 ntBASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm9013-201ENSMUST00000132939 882 ntBASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf13bQ9ET35 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms