Protein–RNA interactions for Protein: Q9ERR1

Ndel1, Nuclear distribution protein nudE-like 1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndel1Q9ERR1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndel1Q9ERR1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndel1Q9ERR1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndel1Q9ERR1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndel1Q9ERR1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndel1Q9ERR1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.37□□□□□ -0.11
Ndel1Q9ERR1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Rubie-203ENSMUST00000227803 2430 ntBASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ndel1Q9ERR1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ndel1Q9ERR1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndel1Q9ERR1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ndel1Q9ERR1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms