Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-4Q9EQM3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Gm12091-201ENSMUST00000146791 830 ntBASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Gm44719-201ENSMUST00000206404 149 ntBASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Gm18062-201ENSMUST00000208020 547 ntBASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Gm18055-201ENSMUST00000208254 547 ntBASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-4Q9EQM3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-4Q9EQM3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-4Q9EQM3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Gm9908-201ENSMUST00000211534 448 ntBASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-4Q9EQM3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Gm24543-201ENSMUST00000103867 82 ntBASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms