Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gm7862-201ENSMUST00000121461 292 ntBASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Efs-202ENSMUST00000227037 2540 ntBASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a3bpQ9EQG9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Gm8655-201ENSMUST00000221159 852 ntBASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a3bpQ9EQG9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a3bpQ9EQG9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Col4a3bpQ9EQG9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms