Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Gm10698-201ENSMUST00000182663 604 ntBASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Matn2-206ENSMUST00000228570 2798 ntBASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps33aQ9D2N9 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps33aQ9D2N9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps33aQ9D2N9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps33aQ9D2N9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.21■□□□□ 0.18
Vps33aQ9D2N9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps33aQ9D2N9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33aQ9D2N9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.19■□□□□ 0.18
Vps33aQ9D2N9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33aQ9D2N9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33aQ9D2N9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33aQ9D2N9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33aQ9D2N9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms