Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rer1Q9CQU3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Gm33142-201ENSMUST00000193913 867 ntBASIC12.52□□□□□ -0.41
Rer1Q9CQU3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.52□□□□□ -0.41
Rer1Q9CQU3 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rer1Q9CQU3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Gm4459-201ENSMUST00000118750 468 ntBASIC12.51□□□□□ -0.41
Rer1Q9CQU3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Gm7506-201ENSMUST00000207758 815 ntBASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Gm18622-201ENSMUST00000219361 595 ntBASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rer1Q9CQU3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms