Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC8.21□□□□□ -1.09
Sec61bQ9CQS8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Gm28064-201ENSMUST00000185639 858 ntBASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Gm37811-201ENSMUST00000192416 2601 ntBASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sec61bQ9CQS8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm43702-201ENSMUST00000198772 2546 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm4995-201ENSMUST00000117247 432 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm14539-201ENSMUST00000117527 174 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm11893-201ENSMUST00000117829 491 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm21156-201ENSMUST00000189693 869 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Gm8396-201ENSMUST00000057361 823 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms