Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chchd1Q9CQA6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Gm6139-201ENSMUST00000079261 882 ntBASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chchd1Q9CQA6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chchd1Q9CQA6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms