Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm4518-201ENSMUST00000182638 718 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col25a1Q99MQ5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Gm25144-201ENSMUST00000179561 110 ntBASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Gm25352-201ENSMUST00000179815 110 ntBASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col25a1Q99MQ5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Gm14767-201ENSMUST00000121559 586 ntBASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Mir1982-201ENSMUST00000157368 74 ntBASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col25a1Q99MQ5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col25a1Q99MQ5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Col25a1Q99MQ5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms