Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Gm9727-201ENSMUST00000161387 555 ntBASIC14.21□□□□□ -0.13
Cdca3Q99M54 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.21□□□□□ -0.13
Cdca3Q99M54 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.21□□□□□ -0.13
Cdca3Q99M54 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cdca3Q99M54 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdca3Q99M54 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cdca3Q99M54 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdca3Q99M54 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdca3Q99M54 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.2□□□□□ -0.14
Cdca3Q99M54 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.2□□□□□ -0.14
Cdca3Q99M54 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdca3Q99M54 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.19□□□□□ -0.14
Cdca3Q99M54 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdca3Q99M54 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Gm4995-201ENSMUST00000117247 432 ntBASIC14.18□□□□□ -0.14
Cdca3Q99M54 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdca3Q99M54 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms