Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp1b1Q99LU0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp1b1Q99LU0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp1b1Q99LU0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
Chmp1b1Q99LU0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Gm24589-201ENSMUST00000116692 94 ntBASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Gm4459-201ENSMUST00000118750 468 ntBASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp1b1Q99LU0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Gm43347-201ENSMUST00000200226 580 ntBASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp1b1Q99LU0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms