Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.63□□□□□ -0.23
Thumpd1Q99J36 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.63□□□□□ -0.23
Thumpd1Q99J36 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.63□□□□□ -0.23
Thumpd1Q99J36 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd1Q99J36 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Gm19164-201ENSMUST00000210667 640 ntBASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd1Q99J36 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Gm9013-201ENSMUST00000132939 882 ntBASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Gm29257-201ENSMUST00000186115 639 ntBASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd1Q99J36 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms