Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.23■□□□□ 0.19
Pcdhb2Q91Y00 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.23■□□□□ 0.19
Pcdhb2Q91Y00 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb2Q91Y00 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb2Q91Y00 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb2Q91Y00 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Gm9727-201ENSMUST00000161387 555 ntBASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Gm27525-201ENSMUST00000184465 107 ntBASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb2Q91Y00 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb2Q91Y00 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb2Q91Y00 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb2Q91Y00 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb2Q91Y00 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.21■□□□□ 0.18
Pcdhb2Q91Y00 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Gm42790-201ENSMUST00000201268 969 ntBASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb2Q91Y00 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Gm15467-201ENSMUST00000120582 445 ntBASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Pcdhb2Q91Y00 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms