Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Gm27628-201ENSMUST00000184911 107 ntBASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx1Q91VR5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.77■□□□□ 0.11
Ddx1Q91VR5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx1Q91VR5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Gm25911-201ENSMUST00000157621 56 ntBASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Chchd1-203ENSMUST00000224633 557 ntBASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx1Q91VR5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms