Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TraipQ8VIG6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
TraipQ8VIG6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TraipQ8VIG6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Gm43474-201ENSMUST00000196415 774 ntBASIC16.2■□□□□ 0.18
TraipQ8VIG6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.2■□□□□ 0.18
TraipQ8VIG6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TraipQ8VIG6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm22065-201ENSMUST00000103753 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm22066-201ENSMUST00000103761 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24932-201ENSMUST00000103763 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24115-201ENSMUST00000103799 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm22190-201ENSMUST00000103827 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm22191-201ENSMUST00000103831 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24721-201ENSMUST00000103849 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm28018-201ENSMUST00000103869 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm26399-201ENSMUST00000103937 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm25349-201ENSMUST00000177728 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm23616-201ENSMUST00000177797 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm25871-201ENSMUST00000177816 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24752-201ENSMUST00000178240 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24496-201ENSMUST00000178287 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm25649-201ENSMUST00000178476 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm25548-201ENSMUST00000178681 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm23147-201ENSMUST00000178841 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm26095-201ENSMUST00000179270 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm22171-201ENSMUST00000179283 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm23936-201ENSMUST00000179354 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm22619-201ENSMUST00000179516 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm25255-201ENSMUST00000179579 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24755-201ENSMUST00000179691 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm26506-201ENSMUST00000179692 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm25086-201ENSMUST00000179931 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm23243-201ENSMUST00000180047 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24659-201ENSMUST00000180212 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm24169-201ENSMUST00000180244 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm23689-201ENSMUST00000180354 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm27359-201ENSMUST00000184153 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm27785-201ENSMUST00000184268 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm27466-201ENSMUST00000184396 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm27703-201ENSMUST00000184836 110 ntBASIC16.19■□□□□ 0.18
TraipQ8VIG6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TraipQ8VIG6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TraipQ8VIG6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms