Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Odf4Q8VI88 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Odf4Q8VI88 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.71□□□□□ -0.22
Odf4Q8VI88 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Odf4Q8VI88 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.7□□□□□ -0.22
Odf4Q8VI88 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.7□□□□□ -0.22
Odf4Q8VI88 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Odf4Q8VI88 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms