Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh18Q8VHR0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Gm10052-201ENSMUST00000168019 960 ntBASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Gm7729-201ENSMUST00000050143 801 ntBASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh18Q8VHR0 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh18Q8VHR0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.77□□□□□ -0.04
Pcdh18Q8VHR0 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh18Q8VHR0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh18Q8VHR0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms