Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.69■□□□□ 0.26
Dnajc28Q8VCE1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Gm44492-201ENSMUST00000197012 141 ntBASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dnajc28Q8VCE1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Gm14701-201ENSMUST00000117156 348 ntBASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Gm18489-201ENSMUST00000172565 551 ntBASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Dnajc28Q8VCE1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Dnajc28Q8VCE1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Dnajc28Q8VCE1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms