Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gm22697-201ENSMUST00000175194 63 ntBASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gm29257-201ENSMUST00000186115 639 ntBASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Mir770-201ENSMUST00000103252 94 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup35Q8R4R6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.46□□□□□ -0.41
Nup35Q8R4R6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup35Q8R4R6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms