Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Gm5366-201ENSMUST00000215494 1338 ntBASIC15□□□□□ -0.01
Chrna3Q8R4G9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna3Q8R4G9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chrna3Q8R4G9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Gm14494-201ENSMUST00000118786 435 ntBASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Prob1-201ENSMUST00000097619 3021 ntBASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chrna3Q8R4G9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms