Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Gm6376-201ENSMUST00000209407 580 ntBASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.47■□□□□ 0.39
Trim29Q8R2Q0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim29Q8R2Q0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim29Q8R2Q0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trim29Q8R2Q0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim29Q8R2Q0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim29Q8R2Q0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Trim29Q8R2Q0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Gm25990-201ENSMUST00000102440 86 ntBASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim29Q8R2Q0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms