Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Gm27622-201ENSMUST00000183779 60 ntBASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp7Q8R1T1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Gm2810-201ENSMUST00000118681 990 ntBASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp7Q8R1T1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp7Q8R1T1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp7Q8R1T1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms