Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp40Q8R1F9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpp40Q8R1F9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpp40Q8R1F9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rpp40Q8R1F9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Rpp40Q8R1F9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Gm25911-201ENSMUST00000157621 56 ntBASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Gm45747-201ENSMUST00000212203 999 ntBASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp40Q8R1F9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Gm44492-201ENSMUST00000197012 141 ntBASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp40Q8R1F9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp40Q8R1F9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms