Protein–RNA interactions for Protein: Q8QZY9

Sf3b4, Splicing factor 3B subunit 4, mousemouse

Known RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4Q8QZY9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Gm43514-201ENSMUST00000198852 424 ntBASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b4Q8QZY9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b4Q8QZY9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b4Q8QZY9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b4Q8QZY9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Gm7862-201ENSMUST00000121461 292 ntBASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sf3b4Q8QZY9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms