Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Gm46209-201ENSMUST00000217912 553 ntBASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.88■□□□□ 0.77
Ddx54Q8K4L0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Gm11425-201ENSMUST00000119608 498 ntBASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Gm9396-201ENSMUST00000076703 567 ntBASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Ddx54Q8K4L0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Gm9522-201ENSMUST00000182394 926 ntBASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Gm43703-201ENSMUST00000200523 763 ntBASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx54Q8K4L0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Ddx54Q8K4L0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ddx54Q8K4L0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms