Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.44□□□□□ -0.1
Clrn1Q8K445 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.44□□□□□ -0.1
Clrn1Q8K445 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Gm7230-201ENSMUST00000173026 815 ntBASIC14.43□□□□□ -0.1
Clrn1Q8K445 Gm27741-201ENSMUST00000185060 237 ntBASIC14.43□□□□□ -0.1
Clrn1Q8K445 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.43□□□□□ -0.1
Clrn1Q8K445 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
Clrn1Q8K445 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Gm7222-201ENSMUST00000117512 906 ntBASIC14.42□□□□□ -0.1
Clrn1Q8K445 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.42□□□□□ -0.1
Clrn1Q8K445 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.42□□□□□ -0.1
Clrn1Q8K445 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn1Q8K445 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms