Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.22■□□□□ 0.35
Syne4Q8CII8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.22■□□□□ 0.35
Syne4Q8CII8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.22■□□□□ 0.35
Syne4Q8CII8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Syne4Q8CII8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Syne4Q8CII8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Gm7653-201ENSMUST00000214567 508 ntBASIC17.21■□□□□ 0.35
Syne4Q8CII8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syne4Q8CII8 Syt7-204ENSMUST00000223586 1344 ntBASIC17.21■□□□□ 0.34
Syne4Q8CII8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Syne4Q8CII8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Syne4Q8CII8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.2■□□□□ 0.34
Syne4Q8CII8 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.2■□□□□ 0.34
Syne4Q8CII8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Syne4Q8CII8 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.2■□□□□ 0.34
Syne4Q8CII8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Syne4Q8CII8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syne4Q8CII8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.19■□□□□ 0.34
Syne4Q8CII8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.19■□□□□ 0.34
Syne4Q8CII8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms