Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rab43Q8CG50 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rab43Q8CG50 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.87□□□□□ -0.03
Rab43Q8CG50 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.87□□□□□ -0.03
Rab43Q8CG50 Gm25948-201ENSMUST00000175334 112 ntBASIC14.87□□□□□ -0.03
Rab43Q8CG50 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Gm18057-201ENSMUST00000208220 503 ntBASIC14.87□□□□□ -0.03
Rab43Q8CG50 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab43Q8CG50 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.86□□□□□ -0.03
Rab43Q8CG50 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.86□□□□□ -0.03
Rab43Q8CG50 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rab43Q8CG50 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab43Q8CG50 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab43Q8CG50 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.85□□□□□ -0.03
Rab43Q8CG50 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.85□□□□□ -0.03
Rab43Q8CG50 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Mir449b-201ENSMUST00000104833 80 ntBASIC14.85□□□□□ -0.03
Rab43Q8CG50 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Gm7774-201ENSMUST00000200064 533 ntBASIC14.85□□□□□ -0.03
Rab43Q8CG50 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.85□□□□□ -0.03
Rab43Q8CG50 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.85□□□□□ -0.03
Rab43Q8CG50 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab43Q8CG50 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms