Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Fam228aQ8CDW1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Gm14722-201ENSMUST00000118943 689 ntBASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam228aQ8CDW1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fam228aQ8CDW1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.04■□□□□ 0.16
Fam228aQ8CDW1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fam228aQ8CDW1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms