Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc38Q8CDN8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Ank2-226ENSMUST00000189368 339 ntBASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc38Q8CDN8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc38Q8CDN8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Gm8318-201ENSMUST00000182954 872 ntBASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.96■□□□□ 0.31
Ccdc38Q8CDN8 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms