Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm8825-201ENSMUST00000182565 998 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm4518-201ENSMUST00000182638 718 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm10252-201ENSMUST00000209541 832 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lysmd4Q8CC84 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lysmd4Q8CC84 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lysmd4Q8CC84 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Gm9013-201ENSMUST00000132939 882 ntBASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Gm23547-201ENSMUST00000158210 271 ntBASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lysmd4Q8CC84 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms