Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Aph1bQ8C7N7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Celf4-206ENSMUST00000224553 1729 ntBASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Gm27646-201ENSMUST00000183989 110 ntBASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aph1bQ8C7N7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aph1bQ8C7N7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Gm12644-201ENSMUST00000119935 606 ntBASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms