Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim9Q8C7M3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim9Q8C7M3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim9Q8C7M3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim9Q8C7M3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim9Q8C7M3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim9Q8C7M3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 AV026068-213ENSMUST00000223675 1171 ntBASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Trim9Q8C7M3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim9Q8C7M3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms