Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Usp44Q8C2S0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Gm14140-201ENSMUST00000119999 995 ntBASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.85■□□□□ 0.45
Usp44Q8C2S0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp44Q8C2S0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.85■□□□□ 0.45
Usp44Q8C2S0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp44Q8C2S0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp44Q8C2S0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp44Q8C2S0 Gm43767-201ENSMUST00000198933 381 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms