Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Sh3rf3Q8C120 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Gm13884-201ENSMUST00000118103 829 ntBASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Gm14722-201ENSMUST00000118943 689 ntBASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Rps4l-201ENSMUST00000071745 943 ntBASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf3Q8C120 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf3Q8C120 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms