Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gm15173-201ENSMUST00000122049 433 ntBASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.76■□□□□ 0.11
Trub1Q8C0D0 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trub1Q8C0D0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Mir8098-201ENSMUST00000184011 137 ntBASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Gm5864-201ENSMUST00000202263 970 ntBASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.75■□□□□ 0.11
Trub1Q8C0D0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trub1Q8C0D0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Gm6550-201ENSMUST00000187574 993 ntBASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Gm9682-201ENSMUST00000197505 556 ntBASIC15.74■□□□□ 0.11
Trub1Q8C0D0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trub1Q8C0D0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms